DETAILS:

COURSE NAME: Advanced Programming For Bioinformatics
COURSE CODE: BIF519
CREDIT: 4
SEMESTER: 3
PROGRAM: MSc Bioinformatics

SYLLABUS

Client - Server Technology, Web servers, Web browsers, HTML forms, Scripting Languages, Form variables, actions, methods & data retrieval from the web, CGI Programming and its alternatives, accessing form values in the server side, file management in the web, Perl DBI Programming, Creating images dynamically using GD in Perl, XML, Using BioPerl to access public databases and different types of files, Regular expressions, string manipulations, data retrieval and manipulation.

TEXT BOOKS

  1. James Tisdall, Mastering Perl for Bioinformatics, Oreilly Publications
  2. Gibas&Jambeck, Developing Bioinformatics Computer Skills, Oreilly Publications